1. When a decker rolls Hide, does he roll vs. every IC present or the host in general? Do all of the IC present add to his Overwatch Rating with their defensive hits?
Once.
IC is just an "extension" of the host.
They are all the same.
Either Host and all IC have you on their spot table or non do. They share.
The Host need to launch Patrol IC in order to have a way of using Matrix Perception to spot you again.
Only Patrol IC that have the "skill" to spot you.
The more evil IC need to wait for the Patrol IC to find the hacker before they can act
(or that the hacker use a Sleaze action that fail)
2. When a decker is running in silent, how often does the host check to see if it notices something is running silently? Does Patrol IC (or some other form of IC) need to be present?
The Host have no way of spotting you unless it run Patrol IC. Most Hosts typically run Patrol IC 24/7 though.
Book does not say how often the Patrol IC get to spot you.
It can be once every single complex action for all we know.
My house rule is that it will run one check when you enter the Host. Then another if you spend time doing something, like a matrix search (which got a base time of 1 minute). If you are successful with a Matrix Attack action the Host will be instant aware that it is under attack and the Patrol IC should start to check every complex action.
Another house rule could be this:
Players get a -2 repeat modifier when doing the same action over and over - this could maybe be applied here as well... this modifier should in that case be reset when the decker does something to alert the Host again; such as successfully using a matrix attack action.
3. If a decker is discovered but not yet marked, do all IC know the decker's location? What about IC brought out on subsequent rounds, assuming the initial wave of IC is destroyed before they arrive?
If a Patrol IC spot the decker then the Host and all other IC will also spot the decker (they are the same).
IC loaded by the Host will also have the decker on their spot table.
The Host and all IC will lose the decker if the decker manage to use the Hide matrix action.
Note, that if the Host got a mark on the decker (either from a failed sleaze attempt or if the Host marked the decker with Probe IC) then the decker first have to successfully Erase Matrix Signature before attempting to Hide.