Well, in the case of something like Invisible #, it makes sense to say you can't just cast a whole bunch of Invisibility spells and be REALLY invisible...
But others are more common sense. You have Fatigued 1, and you got MORE exerted? You don't have 2 separate instances of Fatigued 1. The nature of fire, to me, implies that when something is on fire, and you make it MORE on fire, it's a more dangerous burn rather than being on fire twice.